Thursday, July 23, 2009

Week 5: Histopathology Lab

Name: Nadiah Sukma
Admin number: 0705365E


hello people..

it is now my turn to share the experiences ive gained within this 5 week of very-tiring-yet-fun SIP... First, i have to explain the different parts of the working area. According to our schedule we'll be posted to 4 months of Histopathology lab and a month of Cytology.
In Histo lab, there are;

1. Outside area

  • Reception/ Specimen sorting room
  • Trimming room

2. Inside area- Main lab

  • Embedding
  • Microtomy
  • Staining (H&E and Special Stains)
  • Sorting slides + Verification of patient's form + Signed out to the respectives pathologists

For this month, im posted to the outside area (but most of the time im in the trimming room, assisting the pathologist).

All specimens that comes, will be received at the reception room, where the technologists have to first, verify the specimens against the checklist. If nature and the number of specimens (Specimens A, B anc C etc) correspond to the ones listed on the checklist, they are initialed, electronically dated and billed. Second, all the specimens are then given individual biopsy number (eg PB XXXXX) which will be its ID throughout the whole process.

The specimens will then be sorted out. The small and simple biopsies (eg; polyps, certain gallbladder and appendix) are given to technologists for them to pass (not necessarily trim, cos some are too small) and the large and complex specimens (eg; breast, liver, lung, kidney, nose, colon, ovarian cysts + fallopian tubes, enlarged gallbladder and prostate gland) are for pathologists to trim.

[[fyi: all specimens comes in a bag of formalin to be fixed. they have to be sufficiently fixed for atleast 6 hours before being trimmed]]

and..... all trimmings are done in the trimmning room... (haha!) thats where my main job is... which is to assist the pathologists. there are 3 stations in the room, so 3 pathologist are able to trim at a time. but sometimes more pathogists come in to do other stuff and thats just plain havoc for me...hehe

Before trimming, i have to prepare a set of cassettes (remember during HTech we use green colour cassette to embed?) for each specimens; labelling them with patient's ID, specimen ID and block ID. Then prepare the request/patient's form for pathologists. bla bla bla... n other necessary stuff.....that, in a way or another assist them in their trimming... hehehe

After trimming, the blocks are placed into an automated tissue processor. The process takes around 9.5 hours but is left over night (coz our lab, no night shift) and will be ready at the time that we set (eg; 7.30 am)

Principles of tissue processing:

3 stages of the tissue processing are designed to remove the extractable water from the tissue specimens and replace it with a medium that solidifies to allow sectioning. It must be firm enough to support the tissue and give it the rigidity and at the same time must be soft enough for the knife to cut through the tissue into thin sections with little or no damage.

1. Dehydration of tissue

Since the specimens are prior fixed in formalin, dehydration is to remove both water and the fixative (formalin) from the tissue using graded alcohol (dehydrating fluid). This step is essential because paraffin wax will not penetrate the tissue in presence of water and placing the specimens directly into 100% alcohol will distort the tissue.

2. Clearing the tissue

Since alcohol (dehydrating fluid) is completely not miscible with wax, it has to be removed from tissue and replacing it with fluid that is completely miscible with both dehydrating fluid and embedding medium (paraffin wax). common eg; xylene.

3. Infiltrating the tissue with paraffin wax.

Replacing the clearing agent with paraffin wax; infiltrating (impregnating) the tissue with embedding medium. Specimens are transfered from the clearing agent to molten wax at 60C and diffusion will occur. This step is different from the embedding step itself because at this stage the wax provides support internally and externally to the tissue.

Factors affecting tissue processing rate:

1. Agitation

Too slow => ineffective

Too vigorous => cause damage to soft and friable tissue.

2. Heat

Heat increases the rate of penetration.

3. Viscosity

Low viscosity => easier to diffuse into tissue

4. Vacuum

Removes air bubbles trapped within the tissue and able to bring the processing fluids into more intimate contact with parts of the tissue.

[i dont think stating the steps involved in the processing is appropriate, because there are many type of processing, each different in length time eg; 9.5 hr, 13 hr, 16 hr, and the steps involved are also different]

At the end of the processing, the blocks are ready to be embedded, sectioned and stained. (main lab)

and anw, unlike rachael, i didnt have the chance to witness a post-mortem.. =(

*First posted on THURSDAY 23 july, last editted on Monday.

=) =) =)

13 comments:

  1. Hey Nadiah!

    What reagents do you use to clear the tissue?

    Happy SIP-ing!
    Hakim
    0703555C

    ReplyDelete
  2. helo0 hakim,

    thank u for the question...
    it actually depends on the type of machine which is being used..
    the common reagent is xylene (for Leica and Shandon tissue processor) and the other reagent is isopropanol (for Peloris tissue processor)
    Both solvent are miscible to paraffin wax.

    =) =)

    see ya later..

    ReplyDelete
  3. Hullo Nadiah,
    do you assist the pathologists in recording down the observation of any abnormalities of the specimen during trimming. For my lab, i understand that the pathologists will record their observations of the specimen via a recording device, then the medical technologist will type the observations into the Cerner system(LIS).

    Happy Histo-ing!=)
    Yong Herng
    0702243G

    ReplyDelete
  4. helo0o yong herng..

    Same goes for the pathologists in my lab.. while trimming, they would record their observations of the specimens using a recording device, and at every end of each case, i would have to press download button to send the dictation to the data processing room where they will be type out.
    it is a whole different group of people working there and im not sure whether they are called as the medical technologists too.
    But i hope i made myself clear with my explanation.

    =) =) =)

    thank you for ur comment...!

    ReplyDelete
  5. Hey nadiah,

    how many samples can the automated tissue processor process? You just leave the machine on overnight?

    Indah
    0705361D

    ReplyDelete
  6. hi indah..

    it depends on the brand of the tissue processor, commomly they can take up up to 150 cassettes a time. n yup.. the machine is left overnight..

    =) =)

    ReplyDelete
  7. Hi Nadiah,

    you mentioned that vacuum will increase the interaction area of the specimen and processing fluid by removing the bubbles trapped within the specimen in your entry. Can i know how the vacuum is being introduced? Does this means that the environment inside the processor is all vacuum? If that's the case, how do you insert the specimen? Thanx!

    Hui Juan
    0702012F

    ReplyDelete
  8. HUllo nadia,
    so your lab has a group of people specifically just to interpret and record down the observations from the pathologists?
    THk you for your reply.=)

    Yong Herng;)
    0702243G

    ReplyDelete
  9. What do you mean by viscosity? As in, which substance's viscosity are you talking about? Is it the dye? Sorry if it seems a bit weird.

    ReplyDelete
  10. Hi hui juan...

    In the histo lab, tissue processing is done in an automated machine...
    Even during our htech lesson, Dr Khin did introduce us to this machine. Remember the automated machine with many many chambers?
    So the machine my hospital is using has the ability to enhance the processing of tissue specimens by using heat, vacuum, pressure and agitation. The machine environment is not fully 0r 100% vacuum but i think in the machine there is some part or a chamber that is able to introduce vacuum. It is a very big machine afterall.

    =) =)

    ReplyDelete
  11. Hello yong herng,

    Ermmm... In my hospital, there is another group of ppl who will only type out the observations and interpretations done by the pathologists.

    err..The pathologists will trim and record their observations using a recording device then the dictation will be sent to the data processing room to be documented.

    i hope this explanation help.. haha
    just understand that the another group of ppl just document the dictation. all interpretations are done by the pathologists themselves.
    =) =)

    ReplyDelete
  12. Hi Muna,

    Different fluids used in tissue processing has different viscosity.
    So the choice of dehydrating,clearing and embedding agents will largely influence the rate of the processing.

    for example, there are many type of clearing agents; xylene, toluene, chloroform and each has different viscosity.

    =)

    ReplyDelete
  13. To indah,
    there is a cerrection, Peloris tissue processing machine has a 600-cassettes capacity. So other brand should roughly be around there.

    Sorry for that.. =)

    ReplyDelete